Alright. So I got to outlands and hit 65 and got tired of the same damn ugly ass barrens cat I've had since level 10. So I decided to go get my scorpid for PvP and a new warp stalker that would become my new regular grinding pet.
I was running around doing some quests in outlands with my warp stalker and training it as it's loyalty went up. Few days later, I decided to do some AV and grabbed my scorpid.
To my surprise, when I pulled my scorpid out of the stables, it had -208 training points, but also had Claw rank 9 (Which I'd trained to my warp stalker) and natural armor and great stamina were also trained. Even though it was still at Loyalty Level 1 (Rebellious)
Not really the most useful hunter exploit, I know, but it saves you time training 2 pets seperately.
PS. I apologize if this was posted before, but hey, I searched for "Hunter" and "Hunter pets" and didn't find any threads in the exploit forum containing this information.
Enjoy your uber rebellious pet lol.